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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015810376.1_cds_XP_016496172.1_10421
CDS Infomation

[gene=LOC107815170] [db_xref=GeneID:107815170] [protein=protein PHR1-LIKE 1-like isoform X2] [protein_id=XP_016496172.1] [location=join(10253..10783,10883..11060,11364..11440,11537..11576,12240..12294,12365..12434,12504..12743)] [gbkey=CDS]
Sequence

ATGAGTATCCAGAGGGCTGAACAAACTCATGCATATCACAACAGTGAATTTGCAACTGAT
TGCAATTTAGAATTCCAACAGAATATTGATCAACAGAAATCTACATCATGCTTGGAATTT
TGTTTTCAGCCAGGAACTTCTGCAGAAAATTGCTGCCAACAGGTATCTTGGCCTAATACT
GATTCAACATCAAGAACAATCATAAGCCGAATCGGGTCACCAGCTTCAGCTTTTTTTGCC
ACAGAGAGATTAATACAATATGAATACCAAGACAATAGTTGTCAACTGTCCAAGTATAAT
GATCCTCAATTACCATCATATCCTCAACGCGATTTTCCCAAGATTTCAATGCCATCATTC
ATCAGATCACAGTTGTCAAGTAGTCAACCCCTGGGAGCCTATGGAAATCCTTTCAGCAAT
CTATCGGAGAAAGAGAGGCTAGCGATTCTTAAGAGTAAGTTGCTTGAAGAATTTGATACT
TCAAACAAGCAACCTTCAATGCCAGTTTTCCATGGAAATCAAGATTATGGTCTCTCCAAT
AATTTTAGTGGTTTTAACTTGGAACATGCAAGGCAACAATCTGAAAGTTCATCACCTAAT
AATGTTAATAACTCTGGAGGATCATTATCCAACAAGACGCGGATCAGGTGGACTCAACAT
CTCCACGATCGGTTTGTTGAGTGTGTAAATCGTCTTGGAGGAGCTGACAAGGCAACGCCA
AAGGCAATAGTAAAGCTGATGGATTCAGAAGGCTTAACCATTTTTCATGTAAAAAGCCAT
CTGCAGAAATATCGAAGTGCAAAGTACATCCCTGAATCAGCAGAAGGGAAATCTGAAAAG
ATCGATAGCCCGAATAATGTGACACAGATCAACAGCAAAACCGGGATGCAAATCAAGGAA
GCATTGAATATGCAGCTAGAAGTCCAGAGGCGTCTTCACGAGCAACTAGAGATTCAACGG
AAGTTACAAATGAGGATTGAAGAACAAGGAGAGCAATTGAAGAAGATGTTTGACCAACAA
CAAAAGACAACCAGGAGCCTATTGGAGACACGAAATTCAAGCATTACATCTCCTGTTGAT
TCATTCACCCCACATGAAGAGGAAGATGAAGTTCACGTTGCAGACAGCTTCGATAACACC
AATTTCTCATCTAAAATAACTTACGATGACATGGCAAATGCATCAATTTGA

Peptide Sequence

PEP ID

XP_016496172.1
PEP Infomation

PREDICTED: protein PHR1-LIKE 1-like isoform X2 [Nicotiana tabacum]
Sequence

MSIQRAEQTHAYHNSEFATDCNLEFQQNIDQQKSTSCLEFCFQPGTSAENCCQQVSWPNT
DSTSRTIISRIGSPASAFFATERLIQYEYQDNSCQLSKYNDPQLPSYPQRDFPKISMPSF
IRSQLSSSQPLGAYGNPFSNLSEKERLAILKSKLLEEFDTSNKQPSMPVFHGNQDYGLSN
NFSGFNLEHARQQSESSSPNNVNNSGGSLSNKTRIRWTQHLHDRFVECVNRLGGADKATP
KAIVKLMDSEGLTIFHVKSHLQKYRSAKYIPESAEGKSEKIDSPNNVTQINSKTGMQIKE
ALNMQLEVQRRLHEQLEIQRKLQMRIEEQGEQLKKMFDQQQKTTRSLLETRNSSITSPVD
SFTPHEEEDEVHVADSFDNTNFSSKITYDDMANASI

Transcript Sequence

Gene sequence data has not been registered.